dokempf/dune-jupyter-course

dune-jupyter-course's Issues

Jupyter notebook for Tutorial 01

Jupyter notebook for Tutorial03

Provide Conda environment file for easier setup

Finish Tutorial 00 with descriptive texts for the entire notebook

• Use exercise extension to show scientific results
• Document how to enable necessary Jupyter extensions
• Number all equations not just referenced ones
• Explain existence of solution button in text
• Implement exercise 2 by making local operator definition an exercise cell and provide additional headers for the operator

Add a concept check around the `Dune::printgrid` in `dune/jupyter-kernel/dune/jupyter-kernel/printgrid.hh` so that it only matches Grid implementations

Idea: Visualize Reference Elements by showing SVG or PNG data from https://github.com/dune-project/dune-geometry/tree/master/doc/appl/refelements

Apply a cell threshold to `Dune::printgrid` - it takes excessively long otherwise

Additionally use MIME type `application/json` for `Dune::ParameterTree` - it is supported by JupyterLab and produces a hierarchical structure.

Switching the frontend to JupyterLab

This is a long-term issue tracking the progress towards making JupyterLab the default frontend of the material. It is continuously udpated when new problems arise.

Technically, switching to JupyterLab is easy: Starting jupyter lab instead of jupyter notebook (after install the jupyterlab package) does the trick. There are however some minor and major complications:

Major things to take care of (blockers for the transition):

• Increase the size of the Doxygen documentation - it gets rendered inline and is very small.
• Make sure that the exercise/solution extension we use is compatible with JupyterLab

Here are some minor things to fix when transitioning:

• Make the Docker image use Jupyter Lab
• The VTKWriter rich display link does not work, as it tries to open the file within JupyterLab - which is unsupported.

Also visualize other `VTKWriter`s, suchs as `Subsampling...` or sequence writers (Problem: How do we know the exact files names?)

Visualize `GridView`s the same way that we visualize raw grids.

Jupyter notebook for Tutorial 05

Check `dim == 2` before doing `Dune::printgrid` in `dune/jupyter-kernel/printgrid.hh`

Idea: Visualize quadrature formulae using the code from https://pypi.org/project/quadpy/

Jupyter notebook for Tutorial 02

Jupyter notebook for Tutorial 04.

Check for Exercise/Solution extensions for Jupyter

check extensions (also) working for jupyter lab

Add solutions to gridexercise notebook

Install and enable all necessary extensions in the Docker container