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gwas_scripts

Codebook from my GWAS cookbook

gwa_tutorial

A comprehensive tutorial about GWAS and PRS

in-depth-ngs-data-analysis-course

landgencourse_book

lcwgs-guide-tutorial

lg_chinook

This repository contains all the scripts used to run GEA analyses on the Chinook SNP dataset

liftoff

An accurate GFF3/GTF lift over pipeline

localadaptation_rangeshifts

Source code for "Simulating the effects of local adaptation and life history on the ability of plants to track climate shifts"

local_adaptation

Study about local adaptation on flowering phenology in the perennial plant Gentiana pneumonanthe in response to seed predation by the butterfly Phengaris alcon

local_adaptation.r

Scripts in R for analyses of Identification of SNPs candidates and GEA and GPA studies - PART 4 in LANDSCAPE GENOMICS PIPELINE

managing_your_biological_data_with_python_3

<<Managing Your Biological Data with Python>> wirtten in Python 3

mapmixture

An R package and web app for spatial visualisation of admixture on a projected map

mebioda_methods-in-biodiversity-analysis

Course repository for Methods in Biodiversity Analysis

microbial_comparative_genomics

Micro 612 genomics workshop

nam_phenotypic_plasticity

Genome-wide association analysis of phenotypic plasticity in the maize nested association mapping population

nextjs-notion-starter-kit

Deploy your own Notion-powered website in minutes with Next.js and Vercel.

nowinandroid

A fully functional Android app built entirely with Kotlin and Jetpack Compose

open-interpreter

OpenAI's Code Interpreter in your terminal, running locally

plasticity

An R package to compute several plasticity indices

populus_genomic_prediction_climate_vulnerability

python-cookbook

Code samples from the "Python Cookbook, 3rd Edition", published by O'Reilly & Associates, May, 2013.

qcbs-r-workshop-series_workshop10

Workshop 10 - Advanced multivariate analyses

r-graph-gallery

A website that displays hundreds of R charts with their code

rda-landscape-genomics

rpackages

R package development - the Leek group way!

scripts

Collection of various scripts

snow-precip-leaf

Code for "Phenotypic plasticity and selection on leaf traits in response to snowmelt timing and summer precipitation"

snplift

Convert genetic variant coordinates across genome assemblies

snp_data_analysis

process and analyze snp data from a vcf file

stat-tests

A 30+ node flowchart for selecting the right statistical test for evaluating experimental data.