Comments (7)
I just checked, and it works as is, without any editing. Thank you very much!
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would you please show me the outputs in the first block of the notebook, to check if Unicore is appropriately installed? Seems to me that the installation of unicore is failed. For recycling there is no upper bound, because it doesn’t cost more memory but more time.
from uni-fold.
It seems to download it correctly, but not install correctly:
from uni-fold.
thx for the feedback.
colab (again) updated their python version from 3.8 to 3.9.16, which made the installation failed.
Will PR a fix, but for quicker you may change the cp38
s in the unicore url to cp39
s.
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from uni-fold.
should be fixed in #109 .
from uni-fold.
Hi, I got the same error about the unicore installation. Checked the unicore url, it seems updated. I attached the outputs of the related cells, I'd appreciate any help. Thanks in advance!
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Related Issues (20)
- colab error HOT 8
- Is total_step fixed? HOT 2
- import_jax_weights_ failed on AlphaFold-Multimer 2.3.0 HOT 3
- parameters are missing in the pretrained weights HOT 4
- Multi node training HOT 3
- Could not find path to the "hhblits" binary
- Run Uni-Fold with Bohrium Apps
- FileNotFoundError: No such file or directory: '/C.feature.pkl.gz' HOT 1
- questions on installing on Ubuntu Linux 22.04 HOT 1
- recreating homo_search.py output -- minimal version HOT 3
- competition multimer analysis -- does chain order matter? HOT 7
- model name for all alphafold parameters HOT 1
- multi-gpu inference
- convert_unifold_to_alphafold.py?
- UniFold crash: unable to find SCOPdata (a bug that has popped up in ColabFold, & there is a straightforward reason and patch) HOT 2
- Training with linkers
- Symmetry code doesn’t work HOT 4
- Unifold-Musse training and finetuning scripts as well as the ability to use PDB templates
- Unifold on custom a3m MSA files
- parameters setting
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