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polishingenglishwriting

Some useful works to know when writing a scientific artricle

pre-scnaclonal

Pre-SCNAClonal, the coupling gc bias correction and baseline selection tool for WGS data of paired tumor and normal sample, for SCNAs based subclonal population inferring

progress.js

ProgressJs is a JavaScript and CSS3 library which help developers to create and manage progress bar for every objects on the page.

progressbar

Beamer theme

pscnaclonal-edited-by-ncx

pyloh

Deconvolving tumor purity and ploidy by integrating copy number alterations and loss of heterozygosity

pysim

A python package to simulate structural variation

pysubsimtree

Pysubsim-tree is a bioinformatics tool written by Python for phylogenetically simulating germline and somatic structural variations (SVs) such as deletions, insertions, duplications, inversions, translocations, copy number variations (CNVs), somatic copy number alternation(SCNA) and aneuploidy.

recharts

An interface to ECharts

rednotebook

A cross-platform journal

resume

An elegant \LaTeX\ résumé template

rmfilter

Acceleration of long read-based structure variation calling by chimeric read filtering

roundtablespider

rss2email

open-source tool for Windows, Mac OS and UNIX for getting news from RSS feeds in email

rsvsim

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/RSVSim.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=RSVSim.

saucie

scripts

A collection of my scripts

seclists

SecLists is the security tester's companion. It is a collection of multiple types of lists used during security assessments. List types include usernames, passwords, URLs, sensitive data grep strings, fuzzing payloads, and many more.

seurat

R toolkit for single cell genomics

skippy-xd

A full-screen Exposé-style standalone task switcher for X11.

space-vim-dark

:purple_heart: A dark colorscheme for space-vim that supports GUI and terminal

tcm

Codes used in pan-T cell analysis

vic

A Computational Tool for Assessing Clinical Impacts of Somatic Variants Following the AMP-ASCO-CAP 2017 Guidelines

vim-airline-colornum

Cursor line number color = Airline mode color

vim-colorschemes

one colorscheme pack to rule them all!

vimrc

我的vim配置，由本人整理及修改。用vundle管理插件，针对Python、LaTeX、Fortran等设置。

wdnfinder

WDNfinder: a method for minimum driver node detection