Name: Graham Etherington
Type: User
Company: Earlham Institute
Bio: Senior Computational Biologist in the Haerty Lab, Earlham Institute. I'm interested in Conservation and Population Genomics.
Twitter: bioinformatiks
Location: Norwich, UK
Blog: http://www.earlham.ac.uk/graham-etherington
Graham Etherington's Projects
361 Division - Scientific Training, Education and Learning
assembly evaluation tool
BaseSpace Docs Repo
Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-
SVG format genome browser style pictures
Fast calculation of the ABBA-BABA statistics across many populations/species
Materials for the single-cell RNA Seq course held at EI
A flexible framework to annotate and prioritize cancer somatic mutations.
An extensible Ruby on Rails web-service application and database for visualising HTGS data
Hybridization detection using phylogenetic invariants
The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.
Location of structural errors in a genome assembly and structural variations between a pair of genomes
Earlahm Institute CELLGEN fork of Pipeline for Analysis of Ribosomal Locus Evolution in Yeast (PARsLEY)
Wrapper scripts for scater v1.8.4, plus Galaxy wrappers for scRNA-seq training
Scripts for analysis used during the course
Set of modules for working with htgs reads and related software, maq, Bowtie etc
Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission