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gestures-miccai-2021

Code for "Pérez-García et al. 2021, Transfer Learning of Deep Spatiotemporal Networks to Model Arbitrarily Long Videos of Seizures, MICCAI 2021".

girder

A data management platform for the web, developed by Kitware

graphical-models

highresnet

PyTorch implementation of HighRes3DNet

highresnet-models

homebrew-cask

🍻 A CLI workflow for the administration of macOS applications distributed as binaries

innereye-deeplearning

Medical Imaging Deep Learning library to train and deploy models on Azure Machine Learning

ipmi-coursework

Coursework for UCL MPHYGB06: Information Processing in Medical Imaging

luos-objection

marina-ffmpeg

miccai-educational-challenge-2019

Tutorial about combining PyTorch and NiftyNet for deep learning and medical image computing

miccai-educational-challenge-2020

My submission to the MICCAI Educational Challenge 2020.

muib-tfm

Surgical planning for breast cancer.

ndpytools

Little Python tool to manage Hamamatsu NDPI files

niftyreg

This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities

online-cv

A minimal Jekyll Theme to host your resume (CV)

optimally-oriented-flux

orientations

List of resources to better understand medical images orientation.

pgta

phd-thesis-template

pyblock

pytorch-tests

resector

Algorithm to simulate resection surgery on brain MRI scans. Published in MICCAI 2020, extended in IJCARS.

resseg

RESSEG: automatic segmentation of postoperative brain cavities on 3D MRI using deep learning.

resseg-ijcars

Code, data and model for Pérez-García et al. 2021, "A self-supervised learning strategy for postoperative brain cavity segmentation simulating resections"

ressegijcars

Dummy, temporary repository. You are looking for https://github.com/fepegar/resseg-ijcars

rust-tests

scutoids

semiology-visualisation-tool

slicer

Multi-platform, free open source software for visualization and image computing.