Unknown command celeryd for biocloudcentral/manage.py

[galaxyproject]

Unknown command celeryd for biocloudcentral/manage.py

[afgane]

This could have something to do with RHEL as I've only installed this on Ubuntu but nothing jumps at me.

With the virtualenv activated, what do you see when you issue pip freeze command? If celery is missing, try installing it via pip install celery. This is what I have:

(.cl)launch@athena:/srv/cloudlaunch/cloudlaunch$ pip freeze
Django==1.3
Jinja2==2.7
MarkupSafe==0.18
PyYAML==3.11
South==0.7.3
amqp==1.0.12
anyjson==0.3.3
argparse==1.2.1
billiard==2.7.3.31
bioblend==0.6.2-dev
boto==2.38.0
celery==3.0.21
dj-database-url==0.2.1
django-bootstrap-toolkit==2.12.0
django-celery==3.0.17
gunicorn==17.5
honcho==0.6.6
kombu==2.5.12
mock==1.0.1
nose==1.3.0
poster==0.8.1
psycopg2==2.4.2
python-dateutil==2.1
python-memcached==1.48
pytz==2013b
requests==2.7.0
requests-toolbelt==0.4.0
simplejson==3.3.0
six==1.9.0
wsgiref==0.1.2

While you're at it, I'd sugges updating bioblend to what's in git as some of the recent changes to Cloud Launch require the still unreleased bioblend changes. Just use this command: pip install -U git+https://github.com/galaxyproject/bioblend.git

[MatthewRalston]

I installed the updated bioblend changes as requested with no luck. I'm happy to supply whatever else. RHEL is frustrating indeed. I'm not sure why the output of manage.py --help is such... do you see something else in your build?

/srv/cloudlaunch >pip freeze
amqp==1.0.12
anyjson==0.3.3
billiard==2.7.3.31
bioblend==0.6.1
boto==2.38.0
celery==3.0.21
dj-database-url==0.2.1
Django==1.3
django-bootstrap-toolkit==2.12.0
django-celery==3.0.17
gunicorn==19.3.0
honcho==0.6.6
Jinja2==2.7
kombu==2.5.12
MarkupSafe==0.18
meld3==1.0.2
mock==1.0.1
nose==1.3.0
poster==0.8.1
psycopg2==2.4.2
python-dateutil==2.1
python-memcached==1.48
pytz==2013b0
PyYAML==3.10
requests==1.2.3
requests-toolbelt==0.4.0
simplejson==3.3.0
six==1.9.0
South==0.7.3
supervisor==3.1.3
wheel==0.24.0

[MatthewRalston]

@afgane is does your manage.py script have the "celeryd" command?

[afgane]

Yes it does.

I'm working on an Ansible role to automate the installation process and hopefully help that way. In a basic format, it should be ready today but at least in this iteration it'll still be Ubuntu-only. Can you get a Ubuntu-VM instead of the RHEL?

[afgane]

Here's the Ansible playbook I mentioned: https://github.com/afgane/ansible-cloudlaunch

If you can get access to a Ubuntu machine, feel free to try it out and let me know if you run into any problems. If you'd like to add support for installing the app on a CentOS machine via a PR, we'd appreciate it (or you can send me required system package names and I'll eventually add it).

[afgane]

I also notice that you have some extra python libs and also that some are different versions than what's provided in requirements.txt. Did you install this in a virtualenv?

[MatthewRalston]

It turns out something went wrong with my virtualenv that was triggering the issue. I recreated the virtualenv, got supervisor working, and nginx launched. I encountered another issue with the celery.d process terminating with no error to the supervisor log. Thanks for helping me fix this issue @afgane