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gerard-ompad's Projects

mentsea-chatbot icon mentsea-chatbot

Mentsea is a friendly mental health chatbot for Southeast Asian Countries.

metaflow icon metaflow

:rocket: Build and manage real-life data science projects with ease!

molecule_generator icon molecule_generator

Code for "Multi-Objective De Novo Drug Design with Conditional Graph Generative Model" (https://arxiv.org/abs/1801.07299)

mvarch icon mvarch

Multivariate Volatility Models (ARCH) for stock prices and other time series

object-recognition icon object-recognition

A simple implementation of Computer Vision Object Recognition using YOLO (You Only Look Once), is an extremely fast multi object detection algorithm which uses convolutional neural network (CNN) to detect and identify objects.

pqsar2cpd icon pqsar2cpd

pqsar2cpd is a deep learning algorithm for translation of activity profiles into novel molecules.

promptsmiles icon promptsmiles

Scaffold decoration and fragment linking with chemical language models and RL

rdkittools icon rdkittools

This GitHub repository contains tools and scripts for calculating molecular properties using RDKit, a powerful open-source library for computational chemistry. These tools can be used for in silico drug design, virtual screening, and other applications in medicinal chemistry.

reagents icon reagents

Reagent prediction with Molecular Transformer. Improvement of data for reaction product prediction in a self-supervised fashion.

teemi icon teemi

teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, design libraries, and track samples. Open-source Python platform for workflow flexibility and automated tasks, accelerating metabolic engineering. Try teemi with our Google Colab notebooks!

thesis icon thesis

This is the code of the Masters of Science in Tropical Medicine. An Application of Data Science to Epidemiology.

tuotuo icon tuotuo

Implemented the Smoothed Varational Inference version of Latent Dirichlet Allocation, following David M. Blei et al. 2003

tweedie icon tweedie

Tweedie family density estimation in python

win10-linux-conda-how-to icon win10-linux-conda-how-to

A tutorial on how to set up a Linux environment on a computer running Windows 10. Followed by how to install and use (bio)conda.

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