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prottrans

ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

pubmed-text-mining-tool

A Simple Text Mining Tool for Analyzing Research Paper Abstracts

py-causal

py-earth

A Python implementation of Jerome Friedman's Multivariate Adaptive Regression Splines

py-faster-rcnn

Faster R-CNN (Python implementation) -- see https://github.com/ShaoqingRen/faster_rcnn for the official MATLAB version

pyactr

Python package for ACT-R cognitive models

pyaudioanalysis

Python Audio Analysis Library: Feature Extraction, Classification, Segmentation and Applications

pybel

🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)

pybiopax

PyBioPAX: A python implementation of the BioPAX object model

pybmoore

Python/Cython Boyer-Moore string-search algorithm

pyboolnet

PyBoolNet is a Python package for the generation, modification and analysis of Boolean networks.

pycausal

Python library for causal inference and causal discovery

pyclustering

pyclustring is a Python, C++ data mining (clustering, oscillatory networks, neural networks, etc.) library.

pycon-2016-tutorial

Tutorial: Machine Learning with Text in scikit-learn

pycon-pandas-tutorial

PyCon 2015 Pandas tutorial materials

pycon2016

Code bases, tutorials, posters, and other content for PyCon2016.

pycx

PyCX is a Python-based sample code repository for complex systems research and education.

pydecode

A dynamic programming toolkit.

pydlt

PyTorch based Deep Learning Toolbox

pyfaidx

Efficient pythonic random access to fasta subsequences

pyforest

Lazy-import of all popular Python Data Science libraries

pygsp-feedstock

A conda-smithy repository for pygsp.

pykernels

Python library for working with kernel methods in machine learning

pymc

PyMC: Bayesian Stochastic Modelling in Python

pymc-learn

pymc-learn: Practical probabilistic machine learning in Python

pymc3

Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano

pymc3_models

pymc4

Pre-release development of high-level probabilistic programming interface for TensorFlow

pymeshsim

a module to calculate the MeSH similarity

pynbs

Python 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)