gobbios/radagio

calculate ADAGIO ranks from R

radagio

This package is an R wrapper for the ADAGIO software (http://ngonga.github.io/, https://github.com/ngonga/adagio) that was originally written in Java by Axel Ngonga.

To run it, you need Java SE Development Kit 8 or higher, which is available here: http://www.oracle.com/technetwork/java/javase/downloads/index.html

To check whether you have it installed already you need to run in your terminal/command line java -version or try directly in R system2(Sys.which("java"), "-version").

To install the package use:

library(devtools)

install_github("gobbios/radagio")

The major function is adagio().