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gpcr's Projects
exomecoverage
R script to plot coverage and calculate metrics from exome data
familysearch-javascript-sdk
A javascript library for API interaction with FamilySearch.
gene_lists
List of gene lists for genomic analyses.
genealogic-d3
KISS genealogy tree visualization using d3.js
genmod
Annotate models of genetic inheritance patterns in variant files (vcf files)
genogram-generator
A tool for structuring and visualizing your family genogram
genvisr
Genome data visualizations
germlineenrichment
Variant calling pipeline for germline enrichment NGS data
germvar2
TCGA germline variants
gwas-pw
Pariwise analysis of GWAS
gwas_scripts
Codebook from my GWAS cookbook
hetio
Hetnets in Python
hotmaps
Detects hotspot regions for somatic mutations in 3D protein structures
igv.js
Lightweight html5 version of the Integrative Genomics Viewer
intropolis
Exon-exon splice junctions across SRA
irlba
Implicitly restarted Lanczos methods for fast truncated singular value and symmetric eigenvalue decompositions
json.awk
Practical JSON parser written in awk
kallisto
Near-optimal RNA-Seq quantification
lofreq
LoFreq Star: Sensitive variant calling from sequencing data
macarthur-clinvar-to-vcf
Convert clinvar TSV from MacArthur lab to vcf
melamed_comorbidity
Code for "Genetic similarity between cancers and comorbid Mendelian diseases identifies candidate driver genes". View more information in the ipython notebook
moloco
A tool for performing multiple-trait colocalization test using GWAS summary statistics
mutex
Automatically exported from code.google.com/p/mutex
mutex.resources
Automatically exported from code.google.com/p/mutex.resources
networkd3
D3 JavaScript Network Graphs from R
novelseq
The NovelSeq framework is designed to detect novel sequence insertions using high throughput paired-end whole genome sequencing data.
nutvar2
Classifier of the potential pathogenicity of human genomic truncations
oncoimpact
Cancer-omics Data Integration
oncoprint
Create beautilful oncoprints in R
owltools
OWLTools
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