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bmdx

cpgmotifs

A user-friendly graphical interface that allows searching and visualising motifs linked to CpG sites from differential methylation analyses.

eutopia

eUTOPIA: solUTion for Omics data PreprocessIng and Analysis

funmappone

FunMappOne: a tool to summarize and visually navigate functional categories in multiple experiments.

funmapponepackage

garbo

GARBO, a novel multi-island adaptive Genetic AlgoRithm for biomarker selection in high-dimensional Omics data.

inform

A new tool for Inference of NetwOrk Response Modules

insidenano

INSIdE nano is a web-based tool that highlights connections between phenotypic entities based on their effects on genes. The database behind the INSIdE nano is a network whose nodes are grouped into four categories: Nanomaterial exposures Drug treatments Chemical exposures Diseases For each node in the network, information regarding their effects on the genes is collected. Weights of the edges in the network are correlated to the similarity of these effects between each couple of nodes.

manga

MaNGA is a multi-niche/multi-objective genetic algorithm for QSAR modelling, that simultaneously enables stable feature selection as well as obtaining robust and validated regression models with maximized applicability domain.,

mvda_package

Multi-view clustering methodology in which the information from different data layers (views) is integrated at the levels of the results of each single view clustering iterations.

psoriasis-dermatitis-analysis

Scripts and procedure fo psoriasis and atopic dermatitis transcriptomic analyses

repan

Analysis functions for deep sequenced immune repertoire (Repseq) datasets in R

tindermix

TinderMIX: Time-Dose INtegrated moDelling of toxicogenomics data