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sg-nex-data

Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project

sigfish

sigmap

A streaming method for mapping nanopore raw signals

sigtk

A simple toolkit for manipulating nanopore signal data

simple_bam_parser

A simple BAM file parser

slorado

A simplified version of Dorado built on top of S/BLOW5 format.

slow5

SLOW5 Ecosystem Website

slow5-template

A template repository that demonstrates how slow5lib can be used to develop a new nanopore tool

slow5-template-x

A template that demonstrates the advanced use of slow5lib

slow5lib

slow5lib is a software library for reading & writing SLOW5 files.

slow5specs

Specification of the SLOW5 file format

slow5tools

Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.

slowion

a benchmark tool that can simulate data rates of a nanopore sequencer

socketlibc

A simple and easy to use TCP Linux socket programming library

squigglekit

SquiggleKit: A toolkit for manipulating nanopore signal data

squigualiser

Visualise and analyse ONT raw signals (squigualiser)

squigulator

a tool for simulating nanopore raw signal data

sse2neon

A C/C++ header file that converts Intel SSE intrinsics to ARN NEON intrinsics.

sse2neon-1

A translator from Intel SSE intrinsics to Arm/Aarch64 NEON implementation

webinterfacegpgpu

User-friendly interface for GPGPU programming. Allows running CUDA applications through a web interface rather than from a traditional command line.