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mermaidjs_library_test

mesoderm_induced_escs_pipeline

metabolic_modelling_jupyter_tutorial

metabolomics_lectures

metrefit

Brute force algorithm for finding biosynthetic gaps in COBRA formated constraint-based metabolic models. Can provide models or reaction databases of related species with relative scores on how closely related they are to attempt to fill in gaps. Handles reactions from multiple databases including KEGG, modelSEED, and MetaCyc to attempt to fill.

minigraph

ml

ml-course-vib-2020

ml-engineering

The repository contains all the work including projects, notes, and articles related to ML Engineering while I am learning.

ml-for-beginners

12 weeks, 25 lessons, 50 quizzes, classic Machine Learning for all

ml-foundations

Machine Learning Foundations: Linear Algebra, Calculus, Statistics & Computer Science

ml-in-practice

A demo repo for best practices in ML for R and Python

ml-tidymodels

mlbookcamp-code

The code from the Machine Learning Bookcamp book and a free course based on the book

ml_cnag-crg_course

ml_dl_microarrays

Here, we describe the comparison of the most used algorithms in classical ML and DL to classify carcinogenic tumors described on 11_tumor data base, obtaining accuracies between 76.97% and 100% for tumor identification. Our results bring up a more efficient an accurate classification method based on gene expression (microarray data) and ML/DL algorithms, which facilitates the prediction of the tumor type from a multiple cancer types scenario

modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

modules-1

Nextflow DSL2 modules in use at NIBSC

msnset.utils

custom wrappers of frequently used R code

multiome_datasets

my-first-blog

mygithubpage

My data science website

mymanhattan

R function to generate Manhattan plots using ggplot

m_model_collection

A collection of M models downloaded from published studies

nextflow-course-2023-fall

Nextflow course

nextflow-example

A simple DSL2 workflow: tutorial

nextflow-walkthrough

Nextflow code for "Implementing Scalable Bioinformatic Workflows in Snakemake and Nextflow"

nextflowbioinfosummer2021

nextflowexaample2

nextflowexample1

Use a simple NF example and add github actions to it