Comments (4)
It requires a specific ordering of the input and output files as describing in the README. And yes, only fasta (.fa) format is supported for the output file.
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I believe I ran it wrong then, so the only inputs are the .npy file and the long reads, and the output is just the corrected reads?
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Yes, that's correct, there is an example here.
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Closing due to inactivity
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Related Issues (20)
- Comment on % Pacbio sequences corrected ? HOT 3
- Segmentation fault: 11 HOT 6
- FMLRC (Or Ropebwt) not working correctly HOT 8
- does RNA long reads suit for correction? HOT 1
- Error during msbwt HOT 2
- correcting low cov reads from heterozygous genomes HOT 5
- Error corrupted size vs. prev_size HOT 6
- How to generate RLE BWT format for paired-end illumina data HOT 2
- Question about final command HOT 4
- iterated times matter with the results? HOT 4
- Index no output HOT 9
- [fmlrc-convert] ERROR - unexpected symbol in input: char: " ", hex: "20" HOT 2
- About short reads: insert size and type HOT 3
- Erronneous all-adenine contigs introduced HOT 2
- ../fmlrc-convert: No such file or directory HOT 3
- correct at ends of reads is not completed HOT 2
- Correcting Nanopore long reads with PacBio HiFi HOT 3
- fastq format long read file input? HOT 5
- Q: multiple round of flmrc2? HOT 3
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