Related Issues (20)
- Code coverage - shiny on tests
- $add_metadata() should override columns with same name HOT 2
- Add `phylo` object as metadata HOT 5
- Re-assign genes to other clusters
- Implement $drop(hard = TRUE) HOT 1
- load_pangenomeRDS() fails with old third party objects HOT 1
- Improve internal ggplot2 functions handling
- Bug when `$add_metadata()` with missing key at the end
- Add Willenbrock et al. 2007 coregenome fit function
- panaroo_2_pagoo error HOT 6
- Remove metadata option HOT 3
- Cluster annotations do not match cluster names HOT 5
- Failed with error: ‘package ‘S4Vectors’ required by ‘pagoo’ could not be found’ HOT 14
- panaroo to pagoo, support for bakta annos HOT 29
- Is there a function pagoo_2_roary ? HOT 4
- roary_2_pagoo Error: subscript contains invalid names HOT 35
- gene IDs from Panaroo (1.3.2) presence/absence matrix file do not match IDs in GFF files HOT 6
- Reading gffs: Error in (function (..., row.names = NULL, check.rows = FALSE, check.names = TRUE, : row names contain missing values HOT 3
- how to add metadata in gene_presence_absence.csv file? HOT 1
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