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1d-multigrid-contact-solver

afm_glycocalyx

Matlab coding for AFM raw data post-processing > glycocalyx stiffness fitting

afm_smfs

Matlab coding for AFM SMFS raw data post-processing > localisation and classification of rupture events

afm_youngs_modulus_fit

matlab coding for AFM raw data post-processing > Hertz model to obtain cell Young's modulus

ansys-benchmarks

Benchmark codes for Ansys

chic

ct2s-abaqus-postprocessor

This repository features a Results Processor for mass-analyzing nodal results from finite element analysis (FEA), designed to compute nodal and final average minimum principal strain and Minimum Femur Strength.

ct2s-abaqus-vtkconverter

The VTK to Abaqus INP Converter and Reader simplifies the conversion of VTK files including surface mesh, volume mesh, and those with material properties into Abaqus INP files. It identifies pertinent nodes for boundary/loading conditions and determines the VTK file's element type.

dl-socratis

DL-SOCRATIS we use two different deep learning networks approaches. A combination of a convolution deep neural network for left ventricle detection, and an u-net LGE-MRI trained network for the myocardium segmentation (DLl-SOCRATIS). For the second approach we used a cycle-GAN network to translate the LGE-MR images to cine-MRI and segment the myocardium using an u-net network trained in cine-MR images (DLc-SOCRATIS).

ma-socratis

Multi-Atlas - Segmentation Of Cardiac Regions And Total Ifarct Scar (MA-SOCRATIS) is an unsupervised automatic pipeline that is capable of segmenting ventricular myocardium and scar from late gadolinium enhanced MR images (LGE-MRI) of left ventricle

maf2medical

A software application framework for the rapid development of computer aided medicine applications

maf3tools

Some useful tools for deploy MAF3 vertical applications

microfe

openbf

1D blood flow model

openbf-db

openBF population generator

pfire

The Parallel Framework for Image Registration

ph_3dpatches

A three dimension analyzer of pulmonary hypertension diseases. Three dimensional mapping of the diseases and ratio of each in the total lung area.

pypect2s

A GUI built to provide a contained base for the automation of the CT2S pipeline. With specific focus on paediatric applications. Utilising ANSYS and other FEM solver tools.

qat

templatesphinx

Sphinx template for Insigneo documentations.

tickets

vbiomech

FE poroelastic solver

vph-hf-rabbitmq-cli-client

A command line client interface to RabbitMQ