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aop_bmdt_nanocommons's Introduction

AOP BMDt workflow for NanoCommons Task 6.2 & Deliverable 6.3

You may run this command

docker run -v /folder_with_data/:/home/ -it rstudio/r-base:3.6.3-centos7

Start by using the dependencies.R script to install the necessary Cran and Bioconductor packages

OR build locally the docker from the Dockerfile provided in this repository

BMD analysis performed using BMDExpress 2.3

Version 2.30 BUILD 0488 released on June 9, 2020 with updated annotation files for GPL7202

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