jefdaj Goto Github PK
Name: Jeff Johnson
Type: User
Company: Department of Plant and Microbiology at UC Berkeley
Twitter: jefdaj
Location: Berkeley, CA
Name: Jeff Johnson
Type: User
Company: Department of Plant and Microbiology at UC Berkeley
Twitter: jefdaj
Location: Berkeley, CA
Performant hash trees to dedup large collections of files.
Download Blast databases from ftp.ncbi.nlm.nih.gov/blast/db, validate, and extract.
Automatically exported from code.google.com/p/cdhit
An open-source application for biological image analysis
Conditional Reciprocal Best Blast
Accelerated BLAST compatible local sequence aligner.
A simple directory-like tree datatype, with useful IO functions, for Haskell
A command-line interface description language and parser that will make you smile
Sequence analysis library used by Eddy/Rivas lab code
A Haskell client for Microsofts Electionguard Web API.
A versioning file store backed by git, darcs, or mercurial
The "Git ANnex DedupER" deduplicates files and folders using git-annex.
Incremental improvement of version controlled files.
A wiki using HAppS, pandoc, and git
HMMER: biological sequence analysis using profile HMMs
immortality for your encrypted backups
nix-build for the old InParanoid
declarative and reproducible Jupyter environments - powered by Nix
Lotter is a command-line tool that works with trade data in ledger-cli format.
MMseqs2: ultra fast and sensitive search and clustering suite
Empowered Nix/Guix without root
Example setup for using Nix with SLURM.
Nix Packages collection
Phylogenetic orthology inference for comparative genomics
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.