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hint

HIV Indicators Tool for district level estimates of HIV epidemic indicators

hintr

HIV Indicators Tool R API

hivsubfertility-mmpp

Implement a Markov Modulated Poisson Process (MMPP) model to estimate effect of HIV on fertility by stage of infection

imis-example-parallel

C implementation of Incremental Mixture Importance Sampling (IMIS; Raftery, Bao. Biometrics 2010) using GNU Scientific Library

inla-sandbox

Notes on figuring out the details

jeffeaton.github.io

ktools

Trivial functions

naomi-model-paper

naomi1

Archive of naomi 1.x.x model

orderly

:hospital::ambulance: Lightweight Reproducible Reporting for R

orderly.sharepoint

:office::ambulance::office: orderly on sharepoint

pkgapi

queuer

:walking::walking::walking: Prototype general queue

read-epp-spectrum

R functions to parse output files from Spectrum and EPP programs (used for UNAIDS national HIV epidemic estimates)

reside-ic.github.io

Reside-IC blog

spectrum-frr-estimates

Code for reproducing analysis of fertility rate ratios by age, CD4, and ART status for Spectrum 2019

survey

:exclamation: This is a read-only mirror of the CRAN R package repository. survey — Analysis of Complex Survey Samples. Homepage: http://r-survey.r-forge.r-project.org/survey/

survival

Survival package for R

svyincid

Extend R survey package to analyse household survey-based HIV incidence estimates

tasp-and-early-infection

Code for TasP and Early Infection paper

threemc

Matt's Model for Male Circumcision

tmbtools

Tools for Developing R Packages Interfacing with TMB

tmp-zaf-district

unaids_data_specifications

Specifications for data inputs requested by UNAIDS