Name: Gregory Jefferis
Type: User
Company: MRC Laboratory of Molecular Biology
Bio: develops @natverse, directs collaborative @flyconnectome group at Dept of Zoology, joint head of Division of Neurobiology @ MRC LMB.
Twitter: gsxej
Location: Cambridge, United Kingdom
Blog: http://www2.mrc-lmb.cam.ac.uk/group-leaders/h-to-m/gregory-jefferis/
Gregory Jefferis's Projects
Manifold Dimension Reduction after Chigirev and Bialek
Meshing operations on triangular meshes (surface registration, selection, visualizations, etc.)
Some code built on top of the micromanager 1.2 tree that improved dc1394 support and added a LabJack driver
Mathematical Morphology in Any Number of Dimensions
Colorblind-safe color maps for R
R-package providing a toolset for (3D-based) Geometric Morphometrics
simple standalone BigDataViewer for multiple N5 (or HDF5) datasets
R package wrapping libnabo: fast K Nearest Neighbor search for low dimensions
Interface Between NeuroAnatomy Toolbox and Amira Visualisation Software
Bridge neuroanatomy toolbox ('nat') and 'ANTs' registration tools
NAT: Wrapper for informal neuroanatomy AnalysisSuite codebase
Fork of NeuRA Neural Reconstructions Algorithms
NeuroMatic
Neuromatic/NClamp with Greg's personal extensions
UCL Neuromatic
NMF: A Flexible R package for Nonnegative Matrix Factorization
Showcase of some Drosophila melanogaster neuronal morphologies processed by Virtual Fly Brain.
Dataset of Drosophila male-specific P1 neurons
[Task View]: R "PackageDevelopment" Task View
R package with utility functions to support preparation of journal articles
Simple conversion from Biorad PIC to nifti for use with DTI-TK quicklook plugin
Generate static html documentation for an R package
A test package to highlight problems setting igraph options
A method of using python scripts to manipulate the current document in LyX.
Examples of how to visualise groups of Projection Neurons in Amira
Progress bar in your R terminal
Collection of Python 3 tools to work with neuron data from CATMAID servers
pySolo video extension
Quick serialization of R objects
Batteries included docker image for full natverse