jens-daniel-mueller/bloomsail

In this repository, you find code and explanations to quantify the net community production (NCP) during a cyanobacteria bloom in the Baltic Sea through vertically resolved pCO2 measurements.

bloomsail's Issues

Input Lara

Hi Lara,
please extract data from 2d- and 3d-GETM “E” within date range June 01 - Aug 31 2018 and within lat 57.3 - 57.5. We need the regional mean values for each time step and depth interval (in other words, we do not want to resolve latitudinal patterns within the chosen area).

Based on the extracted data, please produce 3 types of plots:

• Hovmoeller plots: x: time; y: depth (0-80m); col: S, T, and rho; +add mld_rho as white line
• Daily mean profile plots: x: S,T, and rho; y: depth, col: time
• Time series wind speed; calculated from u and v component

I'm not sure if seawater density (rho) is included in the GETM files. If not, leave those plots open and I'll add code to calculate rho from S and T.

Please write all required code in analysis/Finnmaid+GETM.Rmd

Cheers!