jhofman/vbmod_python

python version of vbmod (variational bayes for network modularity)

vbmod_python's Issues

Weave Code Problems

Thanks for contributing your vbmod code.

After struggling with not making simple examples work, I uncommented the python code for Q updates used that instead of the weave (c) code. This was successful. I didn't completely debug the c code, but the weave version of updates appear to be independent of A doesn't give the same answer as the python version, so maybe something is missing?

I have done a few of your todos... breaking out vbmod as a module and separating tasks and the parts the require matplotlib and demonstrating with igraph as well as networkx. Take at look at my fork at https://github.com/DrSkippy/vbmod_python. I don't want to send a pull request unless you indicate since I made many changes to all parts of the code and removed the optimization code. (I am happy to add it back in if it can be debugged easily.)

Thanks again.