jinbinchan/fio-m6a-immune

Prognosis Analysis and Validation of m6A Signature and Tumor Immune Microenvironment in Glioma

Prognosis Analysis and Validation of m6A Signature and Tumor Immune Microenvironment in Glioma

R-code and r data used for analysis and visualization of glioma data.

pca for Figure2b

ssGSEA for Figure3a

correlation&violin for Figure3d

WGCNA for Figure4

lasso for the constrution and calculation of signature and plot for fig5

Citation

Langfelder P, Horvath S. WGCNA: an R package for weighted correlation network analysis. BMC Bioinformatics. 2008;9:559. Published 2008 Dec 29. doi:10.1186/1471-2105-9-559

Hänzelmann S, Castelo R, Guinney J. GSVA: gene set variation analysis for microarray and RNA-seq data. BMC Bioinformatics. 2013;14:7. Published 2013 Jan 16. doi:10.1186/1471-2105-14-7

The data that support the findings of this study are available from the corresponding author upon reasonable request.