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cmt - Contour Membrane Thickness
--------------------------------

Dependencies:

    o Python 3
    o Matplotlib
    o Numpy 


Recommendations:

    Install Anaconda with Python3



usage: cmt.py [-h] [-o output-file] [--verbose] [--levels CONTOUR_LEVELS] [--title TITLE] [--mean MEAN] [--vmin VMIN] [--vmax VMAX] [--rows ROWS] [--cols COLS]
              [--plot-global-average] [--filled | --no-filled] [--smooth-colorbar] [--colormap COLORMAP]
              dat-file [dat-file ...]

Plot membrane thickness grids as contours.

positional arguments:
  dat-file              DAT file(s) to plot.

optional arguments:
  -h, --help            show this help message and exit
  -o output-file        Filename for figure. File extension determines file type.
  --verbose, -v         Set verbose level. Repeated usage increases verbosity.
  --levels CONTOUR_LEVELS
                        Set the number of contour levels.
  --title TITLE         Title for figure.
  --mean MEAN           A real number, "local", "global", or the mean over another dat file. Remove the given mean from each figure.
  --vmin VMIN           Set minimum contour value.
  --vmax VMAX           Set maximum contour value.
  --rows ROWS           Set maximum number of plot rows.
  --cols COLS           Set maximum number of plot columns.
  --plot-global-average
                        Plot the average contour over all inputs.
  --filled              Plot filled contours.
  --no-filled           Plot contours as lines
  --smooth-colorbar     Use a smoothly varying colorbar.
  --colormap COLORMAP   Change the colormap to one supported by Matplotlib or CMashing. Use "list" to see all available colormaps.

Written by Jonathan Coles <[email protected]>