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C++ library for Regularized 2D and 3D Tomography Reconstructions.

C++ 2.54% Python 1.74% Makefile 0.05% Cuda 1.51% C 0.08% HTML 0.02% Jupyter Notebook 94.04% Pascal 0.01% Shell 0.01%
3d-reconstruction cuda inverse-problems regularization tomography

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tomo_tv's Issues

Timing of 3D image reconstruction

Hi Jonathan,

I am Huihuo, working with Yi to optimize your code to run on ALCF machine.

I quickly checked the timing of
This is the timing of 3D/ASD_tv.py.
image

In the current implementation TV minimization took majority of the time. We suggest to use C++ code for the TV part.

The other issue is the definition of recon. It was defined as,
recon = np.zeros([Nslice, Nray, Nray], dtype=np.float32)
should it be recon = np.zeros([Nray, Nray, Nslice], dtype=np.float32) instead?

Huihuo

rename ctvlib::recon to ART

The function name ctvlib::recon is too general.
Better to rename it to ART as we will implement other algorithms in the future.

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