Interface for the FPM microscope
- 2017-04-05_113601.npy
Description: NA = 0.12 with illumination parameters optimization. Pupil centering is made with
<crop_image(image_dict[(theta, phi)], [150, 150], 170, 245).>
Adjusted parameters
- pc.heigth = 88
- pc.platform_tilt = [0, 2.1]
- pc.source_center = [0, 1.9]
- theta_sim_offset = 24
- objective_na: 0.12
- wavelength: 450E-9
- pixel_size: 2.15E-6
- acquire_complete_set.py Acquires acomplete set of images with the parameters set in config.yaml.
- view_and_analyze.py Visualize and compare with teh simulated images.
- generate_sampling.py Simulated images useful for analysis and reconstruction tests.
- optimize.py Optimizes parameter of the illuminator (shift, rotation, etc.).