juliasimd / triangularsolve.jl Goto Github PK
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License: MIT License
rdiv!(::AbstractMatrix, ::UpperTriangular) and ldiv!(::LowerTriangular, ::AbstractMatrix)
License: MIT License
Hello! After upgrading to Julia 1.8, one of my machines is refusing to precompile TriangularSolve. ] add TriangularSolve
(or any other package that has this a dependency) results in the REPL getting stuck at
Precompiling project...
Progress [> ] 0/1
◑ TriangularSolve
I've let it sit for an hour, and nothing changes. On 1.7, I do not experience this issue. I've tried doing a fresh install of julia, to no avail. Interrupting with ctrl+c gives the following
ERROR: The following 1 direct dependency failed to precompile:
TriangularSolve [d5829a12-d9aa-46ab-831f-fb7c9ab06edf]
Failed to precompile TriangularSolve [d5829a12-d9aa-46ab-831f-fb7c9ab06edf] to /home/philip/.julia/compiled/v1.8/TriangularSolve/jl_uahkjT.
signal (2): Interrupt
in expression starting at /home/philip/.julia/packages/TriangularSolve/E948Y/src/TriangularSolve.jl:535
rdiv_block_N! at /home/philip/.julia/packages/TriangularSolve/E948Y/src/TriangularSolve.jl:380
rdiv_block_MandN! at /home/philip/.julia/packages/TriangularSolve/E948Y/src/TriangularSolve.jl:416
div_dispatch! at /home/philip/.julia/packages/TriangularSolve/E948Y/src/TriangularSolve.jl:312
rdiv! at /home/philip/.julia/packages/TriangularSolve/E948Y/src/TriangularSolve.jl:323
unknown function (ip: 0x7f3459fe5b71)
_jl_invoke at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2367 [inlined]
ijl_apply_generic at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2549
macro expansion at /home/philip/.julia/packages/TriangularSolve/E948Y/src/TriangularSolve.jl:543 [inlined]
macro expansion at /home/philip/.julia/packages/SnoopPrecompile/UWvXF/src/SnoopPrecompile.jl:51 [inlined]
macro expansion at /home/philip/.julia/packages/TriangularSolve/E948Y/src/TriangularSolve.jl:540 [inlined]
macro expansion at /home/philip/.julia/packages/SnoopPrecompile/UWvXF/src/SnoopPrecompile.jl:107 [inlined]
top-level scope at /home/philip/.julia/packages/TriangularSolve/E948Y/src/TriangularSolve.jl:536
jl_toplevel_eval_flex at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/toplevel.c:897
jl_eval_module_expr at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/toplevel.c:203 [inlined]
jl_toplevel_eval_flex at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/toplevel.c:709
jl_toplevel_eval_flex at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/toplevel.c:850
ijl_toplevel_eval_in at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/toplevel.c:965
eval at ./boot.jl:368 [inlined]
include_string at ./loading.jl:1428
_jl_invoke at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2367 [inlined]
ijl_apply_generic at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2549
_include at ./loading.jl:1488
include at ./Base.jl:419 [inlined]
include_package_for_output at ./loading.jl:1554
jfptr_include_package_for_output_37424.clone_1 at /home/philip/packages/julias/julia-1.8/lib/julia/sys.so (unknown line)
_jl_invoke at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2367 [inlined]
ijl_apply_generic at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2549
jl_apply at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/julia.h:1838 [inlined]
do_call at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/interpreter.c:126
eval_value at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/interpreter.c:215
eval_stmt_value at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/interpreter.c:166 [inlined]
eval_body at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/interpreter.c:612
jl_interpret_toplevel_thunk at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/interpreter.c:750
jl_toplevel_eval_flex at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/toplevel.c:906
jl_toplevel_eval_flex at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/toplevel.c:850
ijl_toplevel_eval_in at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/toplevel.c:965
eval at ./boot.jl:368 [inlined]
include_string at ./loading.jl:1428
include_string at ./loading.jl:1438
_jl_invoke at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2367 [inlined]
ijl_apply_generic at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2549
exec_options at ./client.jl:301
_start at ./client.jl:522
jfptr__start_30463.clone_1 at /home/philip/packages/julias/julia-1.8/lib/julia/sys.so (unknown line)
_jl_invoke at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2367 [inlined]
ijl_apply_generic at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/gf.c:2549
jl_apply at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/julia.h:1838 [inlined]
true_main at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/jlapi.c:575
jl_repl_entrypoint at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/src/jlapi.c:719
main at /cache/build/default-amdci4-3/julialang/julia-release-1-dot-8/cli/loader_exe.c:59
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x401098)
unknown function (ip: (nil))
Allocations: 26634325 (Pool: 26620513; Big: 13812); GC: 27
Curiously, only one of my machines experiences this issue. The other could upgrade to 1.8 with no issues. Both are Ubuntu 20.04 VMs running on win10 hosts. versioninfo()
gives
julia> versioninfo()
Julia Version 1.8.0
Commit 5544a0fab76 (2022-08-17 13:38 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: 6 × AMD Ryzen 5 3600 6-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-13.0.1 (ORCJIT, znver2)
Threads: 6 on 6 virtual cores
Environment:
JULIA_EDITOR = code
JULIA_NUM_THREADS = 6
In addition, I have the same issue with v0.1.12, although with a slightly different stacktrace upon ctrl+c.
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Hi, I am getting a segfault on Julia 1.6.5 when using TriangularSolve
:
https://gist.github.com/j-fu/03d66b7a48a592516c14001f3f132113
This doesn't happen neither with 1.6.4, nor with 1.7.0.
On this system
julia> versioninfo()
Julia Version 1.8.0-beta1
Commit 7b711ce699 (2022-02-23 15:09 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: 32 × AMD Ryzen Threadripper 2950X 16-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-13.0.1 (ORCJIT, znver1)
Threads: 1 on 32 virtual cores
Environment:
JULIA_EDITOR = code
JULIA_NUM_THREADS =
I get
julia> using TriangularSolve
[ Info: Precompiling TriangularSolve [d5829a12-d9aa-46ab-831f-fb7c9ab06edf]
ERROR: LoadError: DivideError: integer division error
Stacktrace:
[1] vdiv
@ ~/.julia/packages/VectorizationBase/yqq6V/src/llvm_intrin/binary_ops.jl:65 [inlined]
[2] vdiv
@ ~/.julia/packages/VectorizationBase/yqq6V/src/static.jl:56 [inlined]
[3] vcld
@ ~/.julia/packages/VectorizationBase/yqq6V/src/llvm_intrin/binary_ops.jl:79 [inlined]
[4] rdiv_block_MandN!(spc::LayoutPointers.StridedPointer{Float64, 2, 1, 0, (1, 2), Tuple{Static.StaticInt{8}, Int64}, Tuple{Static.StaticInt{0}, Static.StaticInt{0}}}, spa::LayoutPointers.StridedPointer{Float64, 2, 1, 0, (1, 2), Tuple{Static.StaticInt{8}, Int64}, Tuple{Static.StaticInt{0}, Static.StaticInt{0}}}, spu::LayoutPointers.StridedPointer{Float64, 2, 1, 0, (1, 2), Tuple{Static.StaticInt{8}, Int64}, Tuple{Static.StaticInt{0}, Static.StaticInt{0}}}, M::Int64, N::Int64, #unused#::Val{false}, #unused#::Static.StaticInt{1})
@ TriangularSolve ~/git/TriangularSolve.jl/src/TriangularSolve.jl:411
[5] div_dispatch!(C::Matrix{Float64}, A::Matrix{Float64}, U::Matrix{Float64}, #unused#::Val{false}, #unused#::Val{false})
@ TriangularSolve ~/git/TriangularSolve.jl/src/TriangularSolve.jl:312
[6] rdiv!
@ ~/git/TriangularSolve.jl/src/TriangularSolve.jl:323 [inlined]
[7] top-level scope
@ ~/git/TriangularSolve.jl/src/TriangularSolve.jl:542
[8] include
@ ./Base.jl:422 [inlined]
[9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::Nothing)
@ Base ./loading.jl:1399
[10] top-level scope
@ stdin:1
The problem comes in this section
@static if VERSION >= v"1.8.0-beta1"
let
while true
A = rand(1, 1)
B = rand(1, 1)
res = similar(A)
rdiv!(res, A, UpperTriangular(B))
rdiv!(res, A, UnitUpperTriangular(B))
rdiv!(res, A, UpperTriangular(B), Val(false)) # <----- THIS LINE
rdiv!(res, A, UnitUpperTriangular(B), Val(false))
__init__()
ldiv!(res, LowerTriangular(B), A)
ldiv!(res, UnitLowerTriangular(B), A)
ldiv!(res, LowerTriangular(B), A, Val(false))
ldiv!(res, UnitLowerTriangular(B), A, Val(false))
break
end
end
end
I've tried commenting this out, loading the package, and then running the section manually. In this case I get a segfault.
In the latest codebase,
the module imports stridedpointer_preserve from VectorizationBase, which does not seem to include this function anymore. Instead, it looks like it should be imported either directly from LayoutPointers or from LoopVectorizationI tried the latter approach and got an error
[ Info: Precompiling TriangularSolve [d5829a12-d9aa-46ab-831f-fb7c9ab06edf]
ERROR: LoadError: MethodError: no method matching (LayoutPointers.StridedPointer{Float64, 2, 1, 0, (1, 2), X, O} where {X, O})(::Ptr{Float64}, ::Tuple{Static.StaticInt{8}, Static.StaticInt{96}}, ::Tuple{Static.StaticInt{0}, Static.StaticInt{0}})
TriangularSolve.jl/src/TriangularSolve.jl
Line 264 in e425ff5
m_thread_block_size
with nthreads == static(0)
.
The compiler can then prove that
TriangularSolve.jl/src/TriangularSolve.jl
Line 335 in e425ff5
is called as VectorizationBase.vcld(M, 0)
(which ends up calling Base.sdiv_int(x, 0)
which is undefined behavior https://llvm.org/docs/LangRef.html#sdiv-instruction) and returns llvm's poison
value.
Maybe this should just have been static(1)
?
Here is a representative stack trace:
https://buildkite.com/clima/climacore-ci/builds/183#73896f51-3ec9-4099-a226-3217264ed813/96-100
Culprit looks to be a mis-sized buffer?
TriangularSolve.jl/src/TriangularSolve.jl
Lines 288 to 290 in 08ca19b
This also might be resolved with the latest release that adjusted the compat bounds with VectorizationBase
I received the following stacktrace:
ERROR: LoadError: MethodError: no method matching zero_offsets(::LayoutPointers.StridedPointer{Float64, 2, 2, -1, (2, 1), Tuple{Int64, Static.StaticInt{8}}, Tuple{Static.StaticInt{1}, Static.StaticInt{1}}})
Closest candidates are:
zero_offsets(::Static.StaticInt{N}) where N at /Users/simon/.julia/packages/VectorizationBase/pTvQj/src/static.jl:126
zero_offsets(::VectorizationBase.StridedPointer{T, N, C, B, R, X, O} where {X, O}) where {T, N, C, B, R} at /Users/simon/.julia/packages/VectorizationBase/pTvQj/src/strided_pointers/stridedpointers.jl:115
zero_offsets(::VectorizationBase.FastRange{T, Static.StaticInt{0}, S, O} where {S, O}) where T<:Integer at /Users/simon/.julia/packages/VectorizationBase/pTvQj/src/strided_pointers/stridedpointers.jl:466
...
Stacktrace:
[1] div_dispatch!
@ ~/.julia/packages/TriangularSolve/pVj7v/src/TriangularSolve.jl:300 [inlined]
[2] ldiv! (repeats 2 times)
@ ~/.julia/packages/TriangularSolve/pVj7v/src/TriangularSolve.jl:339 [inlined]
[3] reckernel!(A::StrideArraysCore.PtrArray{Tuple{Int64, Int64}, (true, true), Float64, 2, 1, 0, (1, 2), Tuple{Static.StaticInt{8}, Int64}, Tuple{Static.StaticInt{1}, Static.StaticInt{1}}}, pivot::Val{true}, m::Int64, n::Int64, ipiv::StrideArraysCore.PtrArray{Tuple{Int64}, (true,), Int64, 1, 1, 0, (1,), Tuple{Static.StaticInt{8}}, Tuple{Static.StaticInt{1}}}, info::Int64, blocksize::Int64, thread::Bool)
@ RecursiveFactorization ~/.julia/packages/RecursiveFactorization/XJaVF/src/lu.jl:165
[4] reckernel!(A::StrideArraysCore.PtrArray{Tuple{Int64, Int64}, (true, true), Float64, 2, 1, 0, (1, 2), Tuple{Static.StaticInt{8}, Int64}, Tuple{Static.StaticInt{1}, Static.StaticInt{1}}}, pivot::Val{true}, m::Int64, n::Int64, ipiv::StrideArraysCore.PtrArray{Tuple{Int64}, (true,), Int64, 1, 1, 0, (1,), Tuple{Static.StaticInt{8}}, Tuple{Static.StaticInt{1}}}, info::Int64, blocksize::Int64, thread::Bool)
@ RecursiveFactorization ~/.julia/packages/RecursiveFactorization/XJaVF/src/lu.jl:159
[5] recurse!
@ ~/.julia/packages/RecursiveFactorization/XJaVF/src/lu.jl:76 [inlined]
[6] lu!(A::Matrix{Float64}, ipiv::Vector{Int64}, pivot::Val{true}; check::Bool, blocksize::Int64, threshold::Int64)
@ RecursiveFactorization ~/.julia/packages/RecursiveFactorization/XJaVF/src/lu.jl:62
[7] #lu!#2
@ ~/.julia/packages/RecursiveFactorization/XJaVF/src/lu.jl:27 [inlined]
[8] lu! (repeats 2 times)
@ ~/.julia/packages/RecursiveFactorization/XJaVF/src/lu.jl:22 [inlined]
I didn't have time to get a reproducible example, but can try to put one together tomorrow if that would be helpful.
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