justinzzw/metid

Construct database and identify metabolites.

metID

About

metID is a R packge which is used for metabolite identification based on in-house database and public database based on accurate mass, rentention time and/or MS2 spectra.

Installation

You can install metID from Github.

# Install `metID` from GitHub
if(!require(devtools)){
install.packages("devtools")
}
devtools::install_github("jaspershen/tinyTools")
devtools::install_github("jaspershen/metID")

Usage

Please see the Get started page to get the instruction of metID.

Need help?

If you have any quesitions about metID, please don't hesitate to email me ([email protected]).

Citation

If you use metID in you publication, please cite this publication:

X. Shen, R. Wang, X. Xiong, Y. Yin, Y. Cai, Z. Ma, N. Liu, and Z.-J. Zhu* (Corresponding Author), Metabolic Reaction Network-based Recursive Metabolite Annotation for Untargeted Metabolomics, Nature Communications, 2019, 10: 1516.
Web Link.

Thanks very much!