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followers: 57.0 following: 66.0 repos: 122.0 gists: 13.0

Name: João Cavalcante

Type: User

Company: @dalmolingroup

Bio: MSc Student @ BioME / UFRN | Bioinformatics Developer

Twitter: jvcavv

Location: Natal, Brazil

Blog: https://jvfe.github.io/

Bioinformatics Developer ∙ Researcher

🥼 Bachelor in Biomedical Science @UFRN
🧬 Master's student @dalmolingroup/@biomegroup
🦠 Worked developing the ARETE nextflow pipeline @beiko-lab - Dalhousie University
💻 GSoC'21 Student Dev for the R Project for Statistical Computing
👨‍💻 Mostly program in Python and R
🐧 Penguin powered
📊 Check out Wikidata!
💬 Current interests in metagenomics, bioinformatics workflows, computational reproducibility and generative art
🔗 Website
🗎 CV

João Cavalcante's Projects

abm-pandemia

Um modelo toy de pandemias feito como atividade da disciplina Modelagem e Simulação Computacional (IMD0607) da UFRN.

ache-um-bioinformata

Buscando os bioinformatas brasileiros por meio da Wikidata

antismash_latch

Latch workflow to run the antiSMASH pipeline for BGC identification

ardigen_test

Ardigen Recruitment Tasks

arete

AMR/VF LGT focused bacterial genomics analysis workflow

arete-test-data

astrocyte_markers

async_scrape

attractor

Uma versão do Atrator de Lorenz feito para a disciplina Modelagem e Simulação Computacional da UFRN

awesome-compbio-chatgpt

An awesome repository of community-curated applications of ChatGPT and other LLMs im computational biology

bioconda-recipes

Conda recipes for the bioconda channel.

bioinfo_brasil

Um projeto para mapear todo os pesquisadores brasileiros da área de bioinformática e conectá-los entre si através do sistema Wikidata/Scholia

biosoftware2wikidata

bracken_latch

cemitool_latch

Latch workflow to run the CEMiTool Bioconductor package

comparisonmeganxmedusa

contigfunc_latch

A pipeline to screen MAGs for functional components

cookiecutter-compbio

A cookiecutter template for computational biology projects

cookiecutter-snekpack

A cookiecutter package for an enlightened python package

covidpi-report

Just helping out a friend

covidppi

A d3.js visualization of the SARS-CoV-2/Homo sapiens PPI network

curso_rnaseq

d3-fcc

dada2_latch

A Latch workflow for running DADA2

data_analysis_fcc

dataviz-exercises

dotfiles

My configs, managed by dotbot

dvc-showcase

enrichment_tests

etch-a-sketch

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