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followers: 60.0 following: 67.0 repos: 129.0 gists: 13.0

Name: João Cavalcante

Type: User

Company: @dalmolingroup

Bio: MSc Student @ BioME / UFRN | Bioinformatics Developer

Twitter: jvcavv

Location: Natal, Brazil

Blog: https://jvfe.github.io/

Bioinformatics Developer ∙ Researcher

🥼 Bachelor in Biomedical Science @UFRN
🧬 Master's student @dalmolingroup/@biomegroup
🦠 Worked developing the ARETE nextflow pipeline @beiko-lab - Dalhousie University
🍏 Nextflow Ambassador!
💻 GSoC'21 Student Dev for the R Project for Statistical Computing
👨‍💻 Mostly program in Python and R
💬 Current interests in metagenomics, bioinformatics workflows and computational reproducibility
🔗 This is my Website
🗎 CV
☕ You can buy me a coffee if you liked something I made!

João Cavalcante's Projects

pytrials

Python package that wraps around the ClinicalTrials.gov API

rbloggers_tweets

rce-gan

rconferencedash

rconferencedata

reconciler

Python package to reconcile DataFrames

researchercreate

Messing around with some wikidata related things

restaurant-page

rgsocdash

Dashboard of R GSoC Projects

rstatsdashboard

A self-updating dashboard that shows the latest tweets from the #rstats twitter hashtag.

rstudiocommunity

rugsdash

Dashboard of R User Groups

sandbox

Code experiments, learning tools, etc.

scgpt_experiments

Experimenting and writing tutorials for scGPT zero-shot usage cases

shopping-cart

A shopping cart application built as part of the Odin Project Web Curriculum

sketches

sourcepredict_latch

sparql_portfolio

Some useful SPARQL queries

sql-problems

Refreshing my SQL knowledge with some problem sets

sub-maptsk-msg

taxonomy_latch

Latch Workflow to run the Kaiju classifier

tcruzi_gene_exp

Workflow to preprocess and extract T. cruzi gene expression data

test-subworkflow-remote

This is a repository to simulate an nf-core structured remote in another organization

testing-practice

Testing practice with jest

textproc

Toy REST API for basic text processing

twitterexplorer

A template repository for building R-based Twitter dashboards through the power of the flexdashboard package and GitHub Actions.

ukb_ppp_gsmr

Workflow to run GCTA-GSMRs Mendelian Randomization using UKB-PPP data as exposure and a given sumstats as an outcome.

unhost_latch

A Workflow for fastq preprocessing and host read removal

wdt_contribs

wdt_linking

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