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Genomic and Proteomic data exploration and pattern mining

CMake 1.94% Dockerfile 0.28% Scheme 50.48% C++ 0.62% Python 34.53% Shell 8.86% R 3.29%

agi-bio's Introduction

AGI-Bio

Prototype project utilizing the OpenCog framework for genomic research. In particular it aims at experimenting with cognitive synergy between MOSES, PLN and other OpenCog components.

Requirements

Description

-- moses-scripts -- scripts for importing MOSES models into the atomspace and applying PLN

-- knowledge-import -- scripts for converting external knowledge bases into scheme files for importing into the atomspace

-- bioscience - code to be built and installed to provide GeneNode and ProteinNode atoms

-- generated bio data is in separate repo here: [email protected]:opencog-bio/bio-data.git

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