Name: Dr. K. D. Murray
Type: User
Company: Max Planck Institute for Biology Tübingen
Bio: Postdoctoral Fellow in Plant-pathogen Evolutionary Genomics.
Consultant in Bioinformatics.
Formerly at ANU, Canberra
Location: Tübingen, DE
Blog: https://kdmurray.id.au
Dr. K. D. Murray's Projects
BAM utility that swaps the CB (cell barcode) and RG tags, such that each cell is considered a sample in variant calling
C++ API & command-line toolkit for working with BAM data
A bash kernel for IPython
Programme, notes, slides etc. related to BBS meeting prior to MapNet2015
Incubator for useful bioinformatics code, primarily in Python and R
Best-practice pipelines for fully automated high throughput sequencing analysis
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
A columnar data container that can be compressed.
Bioinformatics and Computational Biology Infrastructure for Julia
Conda recipes for the bioconda channel.
A collection of bioinformatics file format specimens to test against
Broken files in various bioinformatic formats with which one can fuzz test parsers
Misc bioinformatics tools
Python module to make writing Ipython analysis workflows easier
Official git repository for Biopython (converted from CVS)
A Collection of Bioinformatic Scripts
Biological sequences for the julia language!
A small package introducing nucleic and amino acid primitive types.
the z in bioinformatics
C bit array structs and methods
Misc sequence tools in python
Bloom filters in Julia
Command line interface to and serialization format for Blosc
Deduplicating archiver with compression and authenticated encryption.
Fast composable IO streams
Build a standalone executables from a Julia script
:bullettrain_side: An oh-my-zsh shell theme based on the Powerline Vim plugin