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melanoma_diagnosis

Install Dependency

  1. Environment Setup cd hact-net conda env create -f environment.yml

  2. DGL conda install -c dglteam dgl-cuda11.3

Train Command

CUDA_VISIBLE_DEVICES=0 python train.py --mg_path /projects/patho4/Kechun/diagnosis/dataset/sure_slices/slice_graphs/cell_graphs --config_fpath ./config/melanoma_mggnn_5_classes_pna.yaml --model_path /projects/patho4/Kechun/diagnosis/checkpoints --in_ram -b 1 --epochs 60 -l 0.0005

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