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gapit3

Genome Association Predict Integrate Tools

gene-is

gitexercise

growmeatissue

Synthethic data generation

harmony

Fast, sensitive and accurate integration of single-cell data with Harmony

herv

hla-bind

Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction

homemade-machine-learning

🤖 Python examples of popular machine learning algorithms with interactive Jupyter demos and math being explained

ideep

iDeep: integrated prediction of RNA-protein binding sites using deep learning

ifn_sens_pd1

illumina-450k

Pipeline for the analysis of Illumina 450k DNA methylation data in R using the Bioconductor package minfi

illumina-utils

A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

illumina450k-methylation

From IDAT to beta.

illumina450k_filtering

A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays

kallisto

Near-optimal RNA-Seq quantification

lantern

🔴蓝灯最新版本下载 https://github.com/getlantern/download 🔴 Lantern Latest Download https://github.com/getlantern/download 🔴

lvis_pipeline

Compile lentiviral vector integration sites from sequencing pipeline

machine-learning

:zap:机器学习实战（Python3）：kNN、决策树、贝叶斯、逻辑回归、SVM、线性回归、树回归

machinelearning

Machine Learning

macropy

Macros in Python: quasiquotes, case classes, LINQ and more!

metaboanalystr3.0

methpipe

A pipeline for analyzing DNA methylation data from bisulfite sequencing.

ml4calibrated450k

This is a companion repository for the article "Comparative analysis of machine learning classifiers and calibration algorithms for estimating class probabilities for personalized cancer diagnostics on DNA methylation microarray data"

mnp_training

DNA methylation-based classification of central nervous system tumours

msisensor

microsatellite instability detection using tumor only or paired tumor-normal data

msk-grail-techval

High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

networkprogramming

网络编程总结

pairwise-alignment-in-python

Pairwise string alignment in Python (Needleman-Wunsch and Smith-Waterman algorithms)

project

pvac-seq

A cancer immunotherapy pipeline