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A Spark-interface for the io.scif and other libraries to take advantage of the ImageJ2 ecosystem.

License: Apache License 2.0

Java 10.79% Scala 89.21%
big-data image-processing distributed-computing scala imagej imagej2

spark-scifio's Introduction

Spark Scifio

A Spark-interface for the io.scif and other libraries to take advantage of the ImageJ2 ecosystem.

import fourquant.io.IOOps._
val fImages = sc.floatImages("cellImgs/*.tif")

It also has a more generic-style support

val pCellImages = sc.genericImages[Double,DoubleType]("cellimages/*.tif", () => new DoubleType)

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