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Detecting contamination in NGS data
License: GNU General Public License v3.0
This project forked from stevenwingett/fastq-screen
Detecting contamination in NGS data
License: GNU General Public License v3.0
FastQ Screen - Contmaination screening for NGS data sets ========================================================== FastQ screen is a simple application which allows you to search a large sequence dataset against a panel of different databases to build up a picture of where the sequences in your data originate. It was built as a QC check for sequencing pipelines but may also have uses in metagenomics studies where mixed samples are expected. The FastQ Screen Homepage is found at: http://www.bioinformatics.babraham.ac.uk/projects/fastq_screen Full documentation on using the software is provided in the PDF file 'fastq_screen_documentation.pdf' and the markdown file 'fastq_screen_documentation.md' distributed with the program.
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