labsyspharm/minerva-cloud-ui

Minerva Cloud is a novel cloud-based (AWS) software for high-dimensional image management, storage and visualization.

Minerva Cloud UI

Administrator user interface for Minerva Cloud. Through the interface, the user is able to:

• View images and repositories
• Manage image and repository access
• Import BioFormats-compatible microscopy images
• Configure channel rendering settings

Setting up the development environment

• Install NodeJS (recent LTS version should work)
• Run in the project directory: npm install

Configure Minerva Cloud url and Cognito

Update package.json property "proxy" to point to your Minerva Cloud API Gateway address.

"proxy": "https://<api_gateway_id>.execute-api.<region>.amazonaws.com"

Update AppConfig.js to contain correct values of region, CognitoUserPoolId and CognitoClientId.

Available Scripts

In the project directory, you can run:

npm start

Runs the app in the development mode.
Open http://localhost:3000 to view it in the browser.

The page will reload if you make edits.
You will also see any lint errors in the console.

npm test

Launches the test runner in the interactive watch mode.
See the section about running tests for more information.

npm run build

Builds the app for production to the build folder.
It correctly bundles React in production mode and optimizes the build for the best performance.

The build is minified and the filenames include the hashes.
Your app is ready to be deployed!

npm run deploy-demo

Deploys the built app to S3 demo bucket "minerva-admin-demo". The bucket name can be changed by editing package.json. Requires that aws command line tools are installed and configured.

To create a hosted website, see AWS CloudFront documentation about how to host a static website from Amazon S3. You should create a CloudFront distribution, that has one origin for the bucket serving static content, and another origin for Minerva Cloud API Gateway. A CloudFront behavior should proxy all requests starting with the API Gateway stage (e.g. /dev) to the API Gateway. All other requests should be proxied to the bucket.

minerva-cloud-ui's Issues

bottom of color box cut off

The bottom of the color box is cut off when adding new channels that are close to the bottom of the screen