leotiez Goto Github PK

biomodelling-tryouts

celljul

chromosomal-data-comparison

chromred4

Reaction-diffusion system for Rad4 and chromatin structures in the nucleus

dd2424

Project for the Deep Learning class at KTH

dd2435

Labs of Mathematical Modelling Of Biological Systems at KTH

deeptools

Tools to process and analyze deep sequencing data.

dense-nucleus

Implementation of the dense nucleus model

dynamical-consequences-of-long-range-patchy-connections-in-the-neocortex

This is the repository for my thesis work about investigating the dynamical consequences of long-range patchy connections in the neocortex, in particular the visual cortex V1.

el2805-rl

Labs of the KTH Reinforcement Learning class 2019

htmresearch

Experimental algorithms. Unsupported.

jmak

Model to find the relationship between DNA repair and biological cellular properties using the JMAK model

leotiez

Config files for my GitHub profile.

linchange

Creates the plots for the linear correlation between two genomic data sets.

nfree

Calculate the size of nucleosome free regions (NFR)

nucleosome-fpca

Combine Pearson correlation with fPCA to assess coordinated nucleosome phasing in yeast

nupic

Numenta Platform for Intelligent Computing is an implementation of Hierarchical Temporal Memory (HTM), a theory of intelligence based strictly on the neuroscience of the neocortex.

parameter-search-reaction-diffision

Optimisation approach to derive parameters of a reaction-diffusion system based on data points

sequential-data-handler

Library to handle and process ChIP-seq data signals.

slamdunk

Streamlining SLAM-seq analysis with ultra-high sensitivity

vanilla-rnn

Vanilla Recurrent Neural Network (RNN) which was part of an assignment of the Deep Learning class (DD2424) in P4 at KTH