Comments (6)
Sure @brianjimenez , here is the output:
absl-py==1.3.0
adal==1.2.7
addict==2.4.0
aiohttp==3.8.3
aiosignal==1.3.1
alabaster==0.7.8
alembic==1.8.1
anyio==3.6.2
applicationinsights==0.11.9
apptools==4.5.0
apturl==0.5.2
argcomplete==1.12.3
argon2-cffi==21.3.0
argon2-cffi-bindings==21.2.0
asttokens==2.0.8
astunparse==1.6.3
async-timeout==4.0.2
attrdict==2.0.1
attrs==22.1.0
autobahn==17.10.1
Automat==0.8.0
autopep8==2.0.0
azure-cli-core==2.34.1
azure-cli-telemetry==1.0.6
azure-core==1.26.1
azure-mgmt-core==1.3.2
Babel==2.6.0
backcall==0.2.0
bcrypt==3.1.7
beautifulsoup4==4.11.1
biopython==1.80
bleach==5.0.1
blinker==1.4
blis==0.7.9
Boruta==0.3
boto3==1.26.45
botocore==1.29.45
Brlapi==0.7.0
cachetools==5.2.0
catalogue==1.0.2
cbor==1.0.0
certifi==2019.11.28
cffi==1.15.1
chardet==3.0.4
charset-normalizer==2.1.1
ci-info==0.3.0
Click==7.0
cloudpickle==2.2.0
colorama==0.4.3
colorlover==0.3.0
command-not-found==0.3
commentjson==0.9.0
configobj==5.0.6
constantly==15.1.0
contourpy==1.0.5
cryptography==38.0.3
cufflinks==0.17.3
cupshelpers==1.0
cupy-cuda101==9.6.0
cycler==0.11.0
cymem==2.0.7
Cython==0.29.14
databricks-cli==0.17.3
dataframe-image==0.1.3
datasets==2.8.0
dblatex===0.3.11py3
dbus-python==1.2.16
debugpy==1.6.3
decorator==5.1.1
defer==1.0.6
defusedxml==0.7.1
deprecation==2.1.0
dill==0.3.6
distro==1.8.0
distro-info===0.23ubuntu1
docker==5.0.3
docker-compose==1.29.2
dockerpty==0.4.1
docopt==0.6.2
docutils==0.16
duplicity==0.8.12.0
entrypoints==0.3
envisage==4.9.0
et-xmlfile==1.1.0
etelemetry==0.3.0
executing==1.1.1
fasteners==0.14.1
fastjsonschema==2.16.2
fastrlock==0.8
filelock==3.8.0
Flask==2.2.2
flatbuffers==22.9.24
fonttools==4.38.0
freesasa==2.1.0
frozenlist==1.3.3
fsleyes==1.5.0
fsleyes-props==1.8.2
fsleyes-widgets==0.12.3
fslpy==3.10.0
fsspec==2022.11.0
fstrings==0.1.0
funcy==1.17
fuse-python==1.0.0
future==0.18.2
gast==0.4.0
gensim==3.8.3
gitdb==4.0.9
GitPython==3.1.29
google-auth==2.13.0
google-auth-oauthlib==0.4.6
google-pasta==0.2.0
greenlet==2.0.0
grpcio==1.50.0
gunicorn==20.1.0
gym==0.26.2
gym-notices==0.0.8
h5py==3.7.0
html5lib==1.0.1
htmlmin==0.1.12
httplib2==0.14.0
huggingface-hub==0.11.1
humanfriendly==10.0
hyperlink==19.0.0
idna==2.8
ImageHash==4.3.1
imageio==2.22.4
imagesize==1.2.0
imbalanced-learn==0.7.0
importlib-metadata==5.0.0
importlib-resources==5.10.0
incremental==16.10.1
iotedgedev==3.3.6
iotedgehubdev==0.14.18
ipykernel==6.16.2
ipynb-py-convert==0.4.6
ipython==8.5.0
ipython-genutils==0.2.0
ipywidgets==8.0.2
isodate==0.6.1
itsdangerous==2.1.2
jedi==0.18.1
Jinja2==3.1.2
jmespath==1.0.1
joblib==1.2.0
json5==0.9.10
jsonpath-rw==1.4.0
jsonschema==3.2.0
jupyter-client==7.4.4
jupyter-console==6.0.0
jupyter-core==4.11.2
jupyter-packaging==0.12.3
jupyter-server==1.21.0
jupyterlab==3.5.0
jupyterlab-pygments==0.2.2
jupyterlab-server==2.16.3
jupyterlab-widgets==3.0.3
keras==2.10.0
Keras-Preprocessing==1.1.2
keyring==18.0.1
kiwisolver==1.4.4
kmodes==0.12.2
knack==0.9.0
language-selector==0.1
lark-parser==0.7.8
laspy==2.3.0
launchpadlib==1.10.13
lazr.restfulclient==0.14.2
lazr.uri==1.0.3
libclang==14.0.6
lightdock==0.9.3.post1
lightgbm==3.3.3
llvmlite==0.39.1
lockfile==0.12.2
looseversion==1.0.2
louis==3.12.0
lxml==4.9.1
lz4==3.0.2+dfsg
macaroonbakery==1.3.1
Mako==1.1.0
Markdown==3.4.1
MarkupSafe==2.1.1
matplotlib==3.5.3
matplotlib-inline==0.1.6
mayavi==4.7.1
meson==0.53.2
missingno==0.5.1
mistune==2.0.4
mlflow==1.30.0
mlxtend==0.21.0
monotonic==1.5
more-itertools==8.0.2
mpi4py==3.0.3
msal==1.20.0
msal-extensions==0.3.1
msrest==0.7.1
msrestazure==0.6.4
multidict==6.0.2
multimethod==1.9
multiprocess==0.70.14
murmurhash==1.0.9
nbclassic==0.4.5
nbclient==0.7.0
nbconvert==7.2.2
nbformat==5.7.0
nest-asyncio==1.5.6
netifaces==0.10.4
networkx==2.8.7
nibabel==4.0.2
nipype==1.8.5
nltk==3.7
notebook==6.5.1
notebook-shim==0.2.0
numba==0.56.4
numexpr==2.8.4
numpy==1.23.4
oauthlib==3.1.0
olefile==0.46
open3d==0.13.0
opencv-contrib-python==4.6.0.66
openpyxl==3.0.10
openshot-qt==2.4.3
opt-einsum==3.3.0
packaging==21.3
pandas==1.5.1
pandas-profiling==3.4.0
pandastable==0.13.0
pandocfilters==1.5.0
paramiko==2.6.0
parso==0.8.3
patsy==0.5.3
pexpect==4.6.0
phik==0.12.2
pickleshare==0.7.5
Pillow==9.3.0
pkginfo==1.8.3
pkgutil-resolve-name==1.3.10
plac==1.1.3
plotly==5.11.0
ply==3.11
plyfile==0.7.4
portalocker==1.7.1
preshed==3.0.8
ProDy==2.0.1
progressbar==2.5
prometheus-client==0.15.0
prometheus-flask-exporter==0.20.3
prompt-toolkit==3.0.31
protobuf==3.19.6
prov==2.0.0
psutil==5.9.3
ptyprocess==0.7.0
pure-eval==0.2.2
py-ubjson==0.14.0
pyarrow==10.0.1
pyasn1==0.4.8
pyasn1-modules==0.2.8
pycairo==1.16.2
pycaret==2.3.10
pycodestyle==2.9.1
pycparser==2.21
pycups==1.9.73
pydantic==1.10.2
pydicom==1.4.1
pydot==1.4.2
pyface==6.1.2
Pygments==2.13.0
PyGObject==3.36.0
PyHamcrest==1.9.0
PyJWT==2.6.0
pyLDAvis==3.3.1
pymacaroons==0.13.0
pymol==2.3.0
PyNaCl==1.3.0
pynndescent==0.5.8
pyod==1.0.6
PyOpenGL==3.1.6
pyOpenSSL==22.0.0
pyparsing==2.4.7
pypng==0.0.20
PyQRCode==1.2.1
PyQt5==5.14.1
pyqtgraph==0.13.1
pyRFC3339==1.1
pyrsistent==0.18.1
pysurfer==0.9.0
python-apt==2.0.0+ubuntu0.20.4.8
python-dateutil==2.8.2
python-debian===0.1.36ubuntu1
python-dotenv==0.21.0
python-snappy==0.5.3
PyTrie==0.2
pytz==2022.5
PyWavelets==1.4.1
pyxdg==0.26
PyYAML==5.4.1
pyzmq==24.0.1
querystring-parser==1.2.4
ranger-fm==1.9.3
rdflib==6.2.0
rdkit==2022.9.1
regex==2022.10.31
reportlab==3.5.34
requests==2.28.1
requests-oauthlib==1.3.1
requests-unixsocket==0.2.0
responses==0.18.0
roman==2.0.0
rsa==4.9
s3transfer==0.6.0
sacremoses==0.0.53
scikit-image==0.19.3
scikit-learn==1.1.3
scikit-plot==0.3.7
scipy==1.5.4
screen-resolution-extra==0.0.0
seaborn==0.12.1
SecretStorage==2.3.1
Send2Trash==1.8.0
sentencepiece==0.1.97
service-identity==18.1.0
shap==0.41.0
simplejson==3.16.0
sip==4.19.21
six==1.14.0
sklearn==0.0
slicer==0.0.7
smart-open==6.2.0
smmap==5.0.0
sniffio==1.3.0
soupsieve==2.3.2.post1
spacy==2.3.8
Sphinx==1.8.5
SQLAlchemy==1.4.42
sqlparse==0.4.3
srsly==1.0.6
stack-data==0.5.1
statsmodels==0.13.4
systemd-python==234
tabulate==0.9.0
tangled-up-in-unicode==0.2.0
tenacity==8.1.0
tensorboard==2.10.1
tensorboard-data-server==0.6.1
tensorboard-plugin-wit==1.8.1
tensorflow-estimator==2.10.0
tensorflow-gpu==2.10.0
tensorflow-io-gcs-filesystem==0.27.0
termcolor==2.0.1
terminado==0.17.0
testpath==0.4.4
textblob==0.17.1
texttable==1.6.4
Theano==1.0.5
thinc==7.4.6
threadpoolctl==3.1.0
tifffile==2022.10.10
tinycss2==1.2.1
tk==0.1.0
tokenizers==0.13.2
tomli==2.0.1
tomlkit==0.11.6
torch==1.12.1
torch-cluster==1.6.0
torch-geometric==2.1.0.post1
torch-scatter==2.0.9
torch-sparse==0.6.15
torch-spline-conv==1.2.1
torchaudio==0.12.1
torchvision==0.13.1
tornado==6.2
tqdm==4.64.1
traitlets==5.5.0
traits==6.3.2
traitsui==6.1.3
transformers==4.25.1
turtle==0.0.1
Twisted==18.9.0
txaio==2.10.0
typing-extensions==4.4.0
u-msgpack-python==2.1
ubuntu-advantage-tools==27.12
ubuntu-drivers-common==0.0.0
ufw==0.36
umap-learn==0.5.3
unattended-upgrades==0.1
urllib3==1.26.12
usb-creator==0.3.7
visions==0.7.5
wadllib==1.3.3
wasabi==0.10.1
wcwidth==0.2.5
webencodings==0.5.1
websocket-client==0.59.0
Werkzeug==2.2.2
widgetsnbextension==4.0.3
wordcloud==1.8.2.2
wrapt==1.14.1
wsaccel==0.6.2
wxPython==4.2.0
xgboost==1.6.2
xkit==0.0.0
xlrd==2.0.1
xxhash==3.2.0
yarl==1.8.1
yellowbrick==1.5
zipp==3.10.0
zope.interface==4.7.1
from lightdock.
scipy's version should >= 1.7.0 to make kmeans2 supporting the seed
keyword.
pip's requirement is >=1.3.1,however.
from lightdock.
Thanks @Elmiar0642 for reporting this issue, it seems the kmeans2()
function has a different signature in your library version. Please, could you provide a pip freeze
output or similar to see the installed Python library versions? Also Python interpreter version would be necessary.
from lightdock.
What about the Python version? In my local environment I'm running scipy version 1.8.1
while the last stable seems to be 1.10.1
.
scipy.cluster.vq.kmeans2()
has a different signature in version 1.5.4
, this requires fixing scipy library version in setup.py to at least 1.7.0
.
from lightdock.
You may want to make a fresh lightdock installation inside a dedicated python environment to avoid conflicts with other python libraries within your system:
python3 -m venv /path/to/new/virtual/environment; source <venv>/bin/activate; pip install lightdock
from lightdock.
Issue addressed at 0.9.3.post2 release.
from lightdock.
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from lightdock.