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markdown-cv

a simple template to write your CV in a readable markdown file and use CSS to publish/print it.

minima

Minima is a one-size-fits-all Jekyll theme for writers.

mobidb-lite_docker

ngs_data_processing

Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.

pileup2singledose

A procedure to call SNP

plant_pkinase_fam.hmm

poplddecay

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files

prunusmumegenome

This is a clone of the genome data of the Prunus mume genome project website (http://prunusmumegenome.bjfu.edu.cn)

saw

scripts

setup-ipsec-vpn

Scripts to build your own IPsec VPN server, with IPsec/L2TP, Cisco IPsec and IKEv2

sharepathway

a python package for KEGG pathway enrichment analysis with multiple gene lists.

smcpp

SMC++ infers population history from whole-genome sequence data.

snphylo

A pipeline to generate a phylogenetic tree from huge SNP data

variant-calling-scripts

Some supplementary scripts for processing variant calling data

vcf-summarize

This is a clone of https://sourceforge.net/projects/vcf-summarize/

vcf_to_ped_converter

This is a clone for ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/technical/browser/vcf_to_ped_converter/version_1.1/vcf_to_ped_convert.pl