Comments (1)
Hi,
biostar139647 ...
this is not the correct way to run the command. It should be something like java -jar jvarkit.jar biostar139647 ....
see the documentation. https://jvarkit.readthedocs.io/en/latest/Biostar139647/
if it still fails, please provide a minimal set of files to reproduce the problem.
from jvarkit.
Related Issues (20)
- BUG:[INFO][Launcher]sam2tsv Exited with failure (-1) HOT 1
- No read groups in bam HOT 1
- COnda request HOT 3
- JAVA_HOME not defined but it is HOT 1
- Build error: failed to create jvarkit.jar object HOT 5
- Task :vcf2bam FAILED HOT 16
- [SEVERE][VcfAncestralAllele]Cannot read non-existent file: ***HELP*** HOT 8
- [SEVERE][MsaToVcf]Duplicate allele added to VariantContext HOT 1
- How to set bin size to plot in wgscoverageplotter command? HOT 1
- unknown error in wgscoverageplotter HOT 2
- Class file version mismatch error while running Jvarkit HOT 1
- blastn2snp compilation errors HOT 2
- request for Biostar398854 - Not called SNPs in lowercase letter in output FASTA
- Some CLPs have not been folded into the monolithic JAR HOT 3
- [minicaller] error message of too many open files HOT 1
- [minicaller] alt alle frequency calculation
- build failed
- jvarkit docker container memory error HOT 3
- msa2vcf can't use given Ref HOT 8
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from jvarkit.