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Zhe Liu's Projects

asw-net icon asw-net

ASW-Net: A Deep Learning-based Tool for Cell Nuclei Segmentation of Fluorescence Microscopy

attadr icon attadr

A psychiatric ddi classfication tool using deep learning network.

chrp icon chrp

Comprehensive Analysis of Peripheral Transcriptomic and Epigenomic Profiles for Predicting Clinical High-Risk Psychosis Transitions

emden icon emden

Predicting the effect of mutations on clinical drug response using graph representation and transformer encoders

emo icon emo

Predicting the effect direction of non-coding mutations on gene expression using deep learning

flask_server icon flask_server

The main backend code for ICDtools server based on flask

memo-stab icon memo-stab

MEMO-stab: Sequence-based Annotation of Mutation Effect on Transmembrane Protein Stability with Protein Language Model-Driven Machine Learning

mippi icon mippi

Inferring the Effects of Protein Variants on Protein–protein Interactions with Interpretable Transformer Representations

soloimc icon soloimc

A Cell Instance Segmentation Tool using SOLOv2.

space-hhblits icon space-hhblits

A sequence-based coding that combines the 3d structure and evolutionary conservation of proteins

tmp-ss icon tmp-ss

A Secondary Structure along with Topology Structure Predictor for Alpha Transmembrane Proteins

tmp-ssurface-2.0 icon tmp-ssurface-2.0

A Deep Learning-Based Predictor for Surface Accessibility of Transmembrane Protein Residues

ukb_anxiety_prs icon ukb_anxiety_prs

Assessing the Polygenic Risk between Anxiety and Gut Microbiota Using Machine Learning

unet icon unet

Unet for image segmentation using Pytorch

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