Name: Simone Maestri
Type: User
Company: Università degli Studi di Milano
Bio: I'm a Biomedical Engineer and Ph. D. in Biotechnology now working as a postdoc at University of Milan
Twitter: SimoneMaestri8
Location: Milano, Italy
bionano_fixdups
A script for removing artificial duplications introduced by Bionano solve scaffolding pipeline
charont
An ONT-based pipeline for characterizing long genomic regions
charont2
A NextFlow ONT-based pipeline for characterizing long genomic regions
covid19_ont_artic
A set of scripts for running the ARTIC pipeline from fast5 ONT data to filtered SARS-CoV-2 variants and coverage plots
entrez_qiime
A utility to generate input files for taxonomy assignment in QIIME from the NCBI database
illumina_variant_calling
A quality check, alignment and small variant calling pipeline for Illumina paired-end reads
maestsi
My personal repository
metablast
A Metagenomic pipeline for parallel Blast analysis and report generation.
metakraken2
A Metagenomic pipeline for Kraken2 analysis and Krona report generation.
metontiime
A Meta-barcoding pipeline for analysing ONT data in QIIME2 framework
mosaicviewer_cnbp
A pipeline for schematic IGV visualization of expanded CNBP alleles with somatic mosaicism
mosaicviewer_fmr1
A pipeline for schematic IGV visualization of FMR1 alleles with somatic mosaicism
mosaicviewer_htt
A pipeline for schematic IGV visualization of HTT alleles with somatic mosaicism
nf-eligos
A NextFlow pipeline for modifications detection from Nanopore direct RNA-seq data
nf-m6anet
A NextFlow pipeline for m6A detection from Nanopore direct RNA-seq data
nf-msspe
A NextFlow pipeline for Metagenomic Sequencing with Spiked Primer Enrichment
ont_preprocessing
A preprocessing pipeline for ONT data
ontohap
An ONT-based pipeline for haplotype phasing
ontrack
A MinION-based pipeline for tracking species biodiversity
ontrack2
A Nextflow MinION-based pipeline for tracking species biodiversity
pycomethflow
A nextflow pipeline for running pycoMeth
qiime2_illumina
A Meta-barcoding pipeline for analysing Illumina data in QIIME2 framework
uminator
A Nextflow pipeline for generating consensus sequences from Nanopore reads tagged with UMIs
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
