Comments (4)
The problem here is with .is_empty
not using the rowSums
function from Matrix
in , because if I put Matrix::rowSums
in the function it works fine. Not sure how to fix this.
from milor.
I don't know why it's not using rowSums from Matrix - this should have been fixed in d30e84e:
#' @importFrom Matrix rowSums
from milor.
@emdann I haven't seen this issue arise since d30e84e - can you confirm, if it's fixed I'll close this issue.
from milor.
I've now refactored this into utils.R and rename .check_empty so it can be used in multiple functions.
from milor.
Related Issues (20)
- List of cells that are part of a neighbourhood of interest highlighted by testNhoods() HOT 2
- Nhoodgroups change when code is re-run HOT 2
- no SpatialFDR generated HOT 1
- Design matrix not full rank - mixture of paired and unpaired samples HOT 1
- Error in comparison of two samples HOT 6
- effect of k and N of PCs on DA analysis HOT 3
- Error when using Build Graph HOT 1
- Call to deprecated Matrix function in calcNhoodDistance() HOT 8
- support for time points from same donor HOT 6
- Calls to non-existent functions in developer 1.71 tutorial HOT 1
- merging Nhood with logFC of opposite sign HOT 12
- testNhoods with multiple contrasts HOT 5
- Error message with findNhoodGroupMarkers HOT 8
- Milo R for scATAC seq HOT 3
- Annotation on plotNhoodExpressionGroups()? HOT 1
- Should I consider RNA assay or Integrated Assay for Milo HOT 5
- DA test found NO SpatialFDR (<0.05) in two groups HOT 1
- Error In buildGraph HOT 2
- runPCA error HOT 9
- plotNhoodGraph doesn't respect factor variables
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from milor.