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hackathon2019_problems's Introduction

Hackathon2019

Coding problems

During the event we will be solving a set of problems with a particular focus on computational biology. The following exercises will cover algorithmic design and automated data analysis tasks.

  • Problems 1-4 will test your algorithmic thinking for which coding solutions can be easily tested.
  • Problem 5 will test you collaborative effort skills.

1. Counting DNA Nucleotides

Count the number nucleotides from a given DNA sequence.

2. Calculating Protein Mass

Calculate protein mass from a given protein sequence.

3. Finding a Motif in DNA

Find a specific motif within a DNA sequence.

4. Rabbits and Recurrence Relations

How many rabbits there are?

5. Automated submission of analyses to online servers

Construct a Python script that automatically submits fasta files to the SignalP 4.1 Server. Create a web clawer and navigate through websites.

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