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Martina Summer-Kutmon's Projects

pathvisiowithinteractionsupport icon pathvisiowithinteractionsupport

This version of the PathVisio (http://www.pathvisio.org/) application works with the new interaction annotation database. The annotation database can be created using the code from https://github.com/pennatula/InteractionDB.git.

regin-creator icon regin-creator

Scripts to create RegINs (Regulatory Interaction Networks) from several different databases

rin-creation icon rin-creation

Scripts to create Regulatory Interaction Networks for CyTargetLinker

rwikipathways icon rwikipathways

R package to connect to the WikiPathways web service and the SPARQL endpoint of WikiPathways

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