Comments (2)
@devonorourke Thank you for providing feedback on our software!
Regarding Problem 1, the BKN_Diversity.thetas.gz.pestPG
file in the shinyGraphing
directory is used as the splash screen and was not meant to be uploaded again. For output files from the tutorial and running angsd-wrapper
, the *.pestPG
file and *.graph.me
file are formatted slightly differently, so the *.pestPG
file will not work if you upload it (unless you make changes to the code of course). Our intention was for users to upload the *.graph.me
file since the software spits out multiple file extensions that could get confusing. I apologize for the confusion with file extension naming schemes. I will change the splash screen BKN_Diversity.thetas.gz.pestPG
file extension name and edit the code appropriately to clarify that.
I am still working on Problem 2 and will get back to you once I have a fix.
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Hi Chaochih,
Any chance Problem 2 was resolved yet from this post?
Thanks very much!
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Related Issues (20)
- bash_profile
- line numbers in common_config HOT 1
- pipefail fails in zsh HOT 8
- ncores
- .txt vs .indF
- shiny file names
- config sourcing order
- args HOT 1
- got this error running fst... HOT 1
- Thetas windowed analysis does not specify an output file
- saf file not interchangeable between wrappers
- Fst is not up-to-date with the version of ANGSD we're using HOT 3
- Calculate SFS without reference genome HOT 1
- 2DSFS Fst output file mystery HOT 2
- install using 'angsd-wrapper shiny graphing' HOT 5
- two pieces: changing delimiter for fread, and an x-lim error HOT 2
- Modify Thetas Shiny Graphing file loading behavior
- export option feature request for Shiny app
- Help with FST in Angsd-wrapper
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