mskcc Goto Github PK
Name: Memorial Sloan Kettering
Type: Organization
Location: New York, NY, USA
Blog: http://www.mskcc.org
Memorial Sloan Kettering's Projects
access-pipeline
cfDNA Sequencing Pipeline with UMI
access_sv
SV calling scripts for ACCESS
agfusion
Python package to annotate and visualize gene fusions.
agreto
Find wild-type sequences of neoantigens and run netMHCpan
aion
Merge module for ARGOS
albany
Mission Albany
align_sample
align_sort_bam
alpha
Alpha (first) pipeline
app-template
Template for new applications at IGO
argos-annote
Annotation tools for Argos
argos-cnv
Copy number module for argos pipeline
argos-cwl
A portable and reproducible pipeline for targeted analysis
argos-qc
Repo for ARGOS QC workflow in CWL
argos_oncoprint
argos_report
Repository for ARGOS report (v1.0.1 Balto)
arrakis
Abra realignment workflow
artisan-fhir-server
assign-bait-set
atlantis
Fingerprint search methods
automation-data-pipeline-of-pathology-digital-slides
awsbatch_mock
AWSBatch Mock built for scaling tests
basicfiltering
Basic filtering scripts for various mutation calling tools
beagle
Voyager Backend
beagle_cli
Beagle API Command Line Utility
blaze-docs
Documentation for the MSK Clinical Research FHIR Server
bravo
bunny
Reproducible Analyses for Bioinformatics - Java; used for Voyager
cas-ops
CAS Operations
cbsp-hackathon
Computational Biology Summer Program Hackathon
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