multi-template-matching/multitemplatematching-fiji

Fiji plugin for object(s) detection using template(s) matching

multitemplatematching-fiji's Issues

cp0 character encoding exception

This is a known bug of Fiji, that does not prevent the execution of the plugin.
It should be fixed in the next ImageJ-launcher release.

How did you organised a multi-script python program for ImageJ?

I understand this question is not really an "issue", but this is the first project that I have seen that managed to use multiple *.py scripts for one plugin. Indeed, this is something I would like to do myself but I am still struggling to find the way. I know that if I drop a *.py file to the /jars/Libs folder, these will be transformed into $*.class files so that I can call the functions in there. However, if instead of a file I drop a folder with several files, they become invisible. Finally, I would like to ask how did you manage to organise the installation logic as you said that by "merging" the Fiji.app folder with the "MultiTemplateMatching-Fiji" folder places all the scripts in the right place.

ROI not appended if RoiManager is closed during processing

It is not expected from the user to quit the Roi Manager during analysis but it could be possible to call it/make it appear every time a ROI is appended (for safety)

Folder mode not working any more

Hi,
I've been using your excellent plugin successfully until now. After the new update to 1.53c, the Folder mode doesn't work any more. When I set everything up and run it, it stops immediately, saying that it's done, even though nothing was computed. There is no error message. The Image and ListImage modes are still fine. I'm using Windows 10.
Many thanks for any suggestion,

Zoltan

ListImage plugin not macro-recordable

The multi-file input is not correctly recorded, it returns the File object identifier.
run("Template Matching ListImage", "template_files=[Ljava.io.File;@6b113364 image_files=[Ljava.io.File;@2db91c40 flipv=false fliph=false method=[Normalised 0-mean cross-correlation] n_hit=4 score_threshold=0.4 max_overlap=0.8000001 show_images=true add_roi=true show_table=true");

No module named bytedeco

-> Make sure that you have activated the IJ-OpenCV update site to have all dependencies necessary

Activating the IJ-OpenCV wont be necessary by using a pom.xml with Maven, once this bug is fixed

opencv not found after installation via update site

Hi,
I have followed the installation procedure via the Fiji updater.
I can see that IJ-opencv and multi-template-matching are installed (as they appear in the plugins dropdown menu).

However, when I run the Template Matching Image function, I have an error saying that the OpenCV dependencies are missing and the following error is raised:
java.lang.NoClassDefFoundError: java.lang.NoClassDefFoundError: Could not initialize class org.bytedeco.javacpp.opencv_core

System:
macOS 12.6.3
Fiji 2.9.0/1.53t

Multiple object detection does not work with ImageJ 1.52n

This bug is fixed from ImageJ 1.52o ie Help>Update ImageJ

Bug when search ROI and image stack used as target image

Apparently only the first image of the stack was processed